10 May 2021, 11:52

Prof. David Rueda: From Single Molecules to Live Cells: Imaging Nucleic Acid-Protein Interactions

Dear Students,

You are cordially invited to an extra lecture of MUNI Life Sciences seminar:

From Single Molecules to Live Cells: Imaging Nucleic Acid-Protein Interactions

by Prof. David Rueda, Imperial College London, UK

 

WHEN: Thursday, May 13, 2021 from 16:00
WHERE: MS Teams - CODE TO JOIN THE TEAM: eeymbmr

Do not hesitate to ask the speaker questions with a microphone after the talk.

Thank you for your cooperation!

Best regards,
Lucie Nesvadbová
lus@sci.muni.cz

Life Sciences Seminar

Abstract of the talk

Understanding how nucleic acids and proteins interact to regulate key cellular processes requires the ability to observe these interactions directly.

The dynamic nature of many nucleic acid-protein interactions makes it challenging to study them with traditional bulk methods. Biochemical, molecular or cellular biology approaches yield ensemble- or population-averaged results, which may conceal key short-lived or low populated intermediates on the reaction pathway.

To overcome the averaging problem, our group develops and applies single-molecule microscopy (SMM) approaches to monitor such interactions in real-time. SMM has become increasingly important in studies of nucleic acid-protein interactions because these techniques provide access to crucial information on how individual molecules or complexes behave in bulk solution and in live cells, revealing the underlying structural dynamics and heterogeneity in the system.

We will present our data investigating some of these interactions on a specific model enzyme that plays key role in essential cellular processes and biotechnology: CRISPR-Cas9. We will also present our recent efforts to image RNA molecules in live and fixed mammalian cells with fluorogenic RNA aptamers (Mango).

 

 

About the laboratory

"We are particularly interested in elucidating various mechanistic aspects of DNA and RNA processing, such as chromatin structure and remodelling, DNA replication and repair, and RNA transcription, splicing and localization. Single-Molecule Microscopy reveals the structural dynamics of individual molecules, otherwise hidden in ensemble-averaged experiments, thus enabling us to directly observe key reaction intermediates, even when short-lived or at low levels. We currently focus on four main areasCRISPR/Cas9 off-target mechanism, DNA repair and chromatin remodelling dynamics, Dynamics of SMC complexes & Single-molecule dynamics in live cells."

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